PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023875911.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 243aa    MW: 27313.8 Da    PI: 5.1238
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023875911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.78.4e-134613899
                    EEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3 38 ledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                    l+ ++g +W+vkl  +k++g++++++GW eF++ + L  g  +vF+++g+s f  ++ +f++
  XP_023875911.1  4 LMIPNGTKWKVKL--TKRDGEVWFQNGWCEFASCHTLTMGHLLVFRYEGNSHF--YILIFDA 61
                    56689********..**********************************9999..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MAFLMIPNGT KWKVKLTKRD GEVWFQNGWC EFASCHTLTM GHLLVFRYEG NSHFYILIFD  60
ATAIEIDYPL DDQLQVCWME DNESDDDSLE IMDGFTRGEG SRSAHGVGGN RVGCKTSPLV  120
KPESDCNMDD VSSSHDQCPK KDGDVDENLV RANAFNSENP LFTVIIHPSY INGKDHASLP  180
HGIINYLPRE GFIKDYTKGS ILAMKLQVVD RLWHVKLYVY ERSMGSSCVV SAGCSAFARE  240
NTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-22B3 family protein