PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023876361.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 168aa    MW: 18896.5 Da    PI: 7.286
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023876361.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR139.71.6e-12451162789
            FAR1  27 eitkrtfvCskegkreeekkk........tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                      +t+  +vC  +g+r++++          ++k++ + ++ rtgC+a+l+v k+k  +kw+v+ ++++HnH +
  XP_023876361.1  45 DVTSCIYVCCSKGQRKTKNALdsglsrddENKAHISCSSLRTGCEAMLRVMKNKkLQKWVVKGFDNNHNHGI 116
                     578889********99988778999988777777799999**********999989**************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MECEELYDAL NNSRPSEEEL PLEDFSDCEL KSKPYVGMQF DSLNDVTSCI YVCCSKGQRK  60
TKNALDSGLS RDDENKAHIS CSSLRTGCEA MLRVMKNKKL QKWVVKGFDN NHNHGIISPK  120
SVSYIRCHKK MSTAAKSLVE KFGEEGFPTG KVAMMFNVGD QTFTSRDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.13e-10FAR1 family protein