PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023876547.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 207aa    MW: 23238.7 Da    PI: 7.3632
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023876547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86e-114185655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     ++ErrRR+++ +++  Lr l+P       + ++Ka+i e A+ YI +Lq
  XP_023876547.1 41 LQAERRRRQKLSDRLLALRALVPII-----TNMNKATIIEDAISYIEELQ 85
                    579*********************6.....58*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MEYVGSALDG LFITKEGNSR GRVGRRRYSN DDGTEFKSKN LQAERRRRQK LSDRLLALRA  60
LVPIITNMNK ATIIEDAISY IEELQNNVKV LQGLLYEMEA SSEEGALPRS EEIDPAEEMR  120
KSGIQAEVEV TQIDGNKLWI KIIFEKKRGG FTRLMEAMTA FGFELIDTSV TTSKGAMLVS  180
SCVKGIHGEI NVVQRTKELL LQIINGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12550RRRYSNDDGTEFKSKNLQAERRRRQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.13e-52bHLH family protein