PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023876598.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 251aa    MW: 28119 Da    PI: 6.5291
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023876598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.7e-1195141554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +  rE+ RRdr+N++f eL ++l +    + +K++Ka iL  Av+ + +L
  XP_023876598.1  95 KACREKMRRDRLNDRFMELGSILDPG---RPPKMDKAVILGDAVRMLTQL 141
                     678**********************8...89**************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MEHREMGCQG NENPSSWMFD EYNLMEDISV TSLLDPTGVF ASTSWPSPPP HLSFSNPTSL  60
SMEQIDDSFP NSDGPKEISS RKRVRSGSCT TSGSKACREK MRRDRLNDRF MELGSILDPG  120
RPPKMDKAVI LGDAVRMLTQ LRDEAQKLKE SKMDLQEKIN ELKAEKNELR DEKQRLKVEK  180
ENLEKNVKAL STQPGYLPHP PAIPAPFSAP GQVVGSKLVP FMGYPGVSMW QFMPPASVDT  240
SQDHFLRPPV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-78bHLH family protein