PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023876599.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 389aa MW: 44984.6 Da PI: 4.43

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023876599.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107.1	1.4e-33	16	109	2	102
HHHHHHHHHCTGGGTTTSEES..SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws..engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k ye+++de+++++isw+ e+ nsfv++d++ef+ k+Lp yFkh+nf+SF+RQLn+YgF+k+++++ weF+++ F +++k+ll XP_023876599.1 16 FLTKCYEMVDDEATDSIISWTqpESCNSFVIWDMTEFSVKLLPLYFKHNNFSSFMRQLNIYGFRKIDTDR---------WEFANDGFVRDQKHLL 101 9******************76677*************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i r+k+ XP_023876599.1 102 KNICRRKK 109 ***987 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MVRKSKENGS DSVAPFLTKC YEMVDDEATD SIISWTQPES CNSFVIWDMT EFSVKLLPLY 60 FKHNNFSSFM RQLNIYGFRK IDTDRWEFAN DGFVRDQKHL LKNICRRKKL QQQDNSDGPA 120 ENIENIGLWK EVESLKTDKN LVMQELIKLR QHQESSDDKL LHLRDRLQGM ETNQQQMLSF 180 LVMAMQSPGI LVQLLQPKEK NWHMLEEGKE DDRPVASDGM IVRYQPPVGE TPKPLHTATP 240 SSEKQQESDP SPDGKKDFFL SPDFMKMLMD EKLCSLDTHA PFMLPDSPDD GAWEQLLLAS 300 PFLENDEDGK MDDEELIDSE MEMESTESKS QLEMSQNFER LMEQMEKSQY LGMESSIDKA 360 HLGKSQNLEF LTEQMGLLSS EPNNKHSSE

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MVRKSKENGS DSVAPFLTKC YEMVDDEATD SIISWTQPES CNSFVIWDMT EFSVKLLPLY  60
FKHNNFSSFM RQLNIYGFRK IDTDRWEFAN DGFVRDQKHL LKNICRRKKL QQQDNSDGPA  120
ENIENIGLWK EVESLKTDKN LVMQELIKLR QHQESSDDKL LHLRDRLQGM ETNQQQMLSF  180
LVMAMQSPGI LVQLLQPKEK NWHMLEEGKE DDRPVASDGM IVRYQPPVGE TPKPLHTATP  240
SSEKQQESDP SPDGKKDFFL SPDFMKMLMD EKLCSLDTHA PFMLPDSPDD GAWEQLLLAS  300
PFLENDEDGK MDDEELIDSE MEMESTESKS QLEMSQNFER LMEQMEKSQY LGMESSIDKA  360
HLGKSQNLEF LTEQMGLLSS EPNNKHSSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	1e-105	HSF family protein