PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023876604.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 204aa    MW: 23009.5 Da    PI: 10.06
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023876604.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.44e-114894554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +  rE+ RRdr+N++f eL ++l +    + +K++Ka iL  Av+ + +L
  XP_023876604.1 48 KACREKMRRDRLNDRFMELGSILDPG---RPPKMDKAVILGDAVRMLTQL 94
                    678**********************8...89**************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MLRFIAHSKK FDTSMEQIDD SFPNSDGPKE ISSRKRVRSG SCTTSGSKAC REKMRRDRLN  60
DRFMELGSIL DPGRPPKMDK AVILGDAVRM LTQLRDEAQK LKESKMDLQE KINELKAEKN  120
ELRDEKQRLK VEKENLEKNV KALSTQPGYL PHPPAIPAPF SAPGQVVGSK LVPFMGYPGV  180
SMWQFMPPAS VDTSQDHFLR PPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-78bHLH family protein