PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023876670.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 986aa MW: 107231 Da PI: 6.4009

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023876670.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.4	5.2e-18	239	309	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C..................TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.as...............kapskKlsKaeiLekAveYIksLq 55 ++++hn +E+r+R+++N+++ eLr +P+ ++ +p+ Kl+Ka++ kA+eYI++L+ XP_023876670.1 239 KKTSHNVIEKRYRNNLNDKIVELRNSVPSlRVmgktngggrdedlegLTPAHKLNKATVMGKATEYIRHLE 309 799************************555***********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 986 aa Download sequence
MWQEQEPFSA KLDDGHGEDW EDWLRWDPAA EQEGTSPENG TVTTAGSSKN DSPLQENVFP 60 AEGFGSKMLD VELLEPPMIM GVDSLDFAAD PLALDQPFLF GATEDTAFDF NQNGVAPLMP 120 AQSAAIVAEP TGSTWPTAPD ALPDHLILST TPAGRDENVF VHQGLSSATS TATFSLQYSP 180 QSSTHTDDKT SSNKSQSSSP KPPPKKRGGR KRKIDVEAER QQREENEKGS QDGDEPPLKK 240 TSHNVIEKRY RNNLNDKIVE LRNSVPSLRV MGKTNGGGRD EDLEGLTPAH KLNKATVMGK 300 ATEYIRHLEK RNKSMADEMD VLKARLAAVE AAIGRSDDRR PSANSSPTTP FARSREGSST 360 SQGYLNVPHE QPRWGSTTMQ PQYSQQQQHP TYARQPNPPV DAKSQPQFVN GRGGGAMTKI 420 MLGAMAGVMV MEGFQQSDEE TRGLAAMPSF IIRHGLDFFS PASPHSRQAI VPLIKVVLVI 480 GCIFYLLMPL LTVSKGRPHP KSRSSVRLPH APSLASPVEV RRKAWLTAMQ TVYVPKHFLL 540 EVVNVLSKMA ILSTRRLIGS EAYNSLTGTN KEEEAARIKA WDIAIDAQLA GGDAEVSYYR 600 LLLTLMASGT LPDSPTRLMQ KAVHFRVFFW DVANAGYGNI LGFKSFTEKV GKFYWDSARK 660 LQKEILHAQA QGRPCGGDES ELLPDHLASL LELDCDDVLG DEMIQRAWNL AWNKPSAYAL 720 TPHAAKDSVV EDHAIRSPLD AVAAWYANMT VDDTLVEVLG EHHSSLDTEY YIFLAISIAP 780 PASATHVRAL AAKAVLFNRK RESNIIAALE AFPMTAPVIA GNMNLVSHAP ASPDLCMALT 840 LAKLLALLTP NQCLAARKRA HHMLANLHVV PGDFSLLSAV AAYRLLRSSH TDRRMSDAAT 900 QGLEDMAANL RLWIGTSAGR NVGLDAEGCG RVVDLCLAVA RKVGGWEEQD SGYGSAYPSH 960 SASASESDEG GASKGSALRA PEVTSS

Sequence ? help Back to Top

Protein Sequence Length: 986 aa Download sequence

MWQEQEPFSA KLDDGHGEDW EDWLRWDPAA EQEGTSPENG TVTTAGSSKN DSPLQENVFP  60
AEGFGSKMLD VELLEPPMIM GVDSLDFAAD PLALDQPFLF GATEDTAFDF NQNGVAPLMP  120
AQSAAIVAEP TGSTWPTAPD ALPDHLILST TPAGRDENVF VHQGLSSATS TATFSLQYSP  180
QSSTHTDDKT SSNKSQSSSP KPPPKKRGGR KRKIDVEAER QQREENEKGS QDGDEPPLKK  240
TSHNVIEKRY RNNLNDKIVE LRNSVPSLRV MGKTNGGGRD EDLEGLTPAH KLNKATVMGK  300
ATEYIRHLEK RNKSMADEMD VLKARLAAVE AAIGRSDDRR PSANSSPTTP FARSREGSST  360
SQGYLNVPHE QPRWGSTTMQ PQYSQQQQHP TYARQPNPPV DAKSQPQFVN GRGGGAMTKI  420
MLGAMAGVMV MEGFQQSDEE TRGLAAMPSF IIRHGLDFFS PASPHSRQAI VPLIKVVLVI  480
GCIFYLLMPL LTVSKGRPHP KSRSSVRLPH APSLASPVEV RRKAWLTAMQ TVYVPKHFLL  540
EVVNVLSKMA ILSTRRLIGS EAYNSLTGTN KEEEAARIKA WDIAIDAQLA GGDAEVSYYR  600
LLLTLMASGT LPDSPTRLMQ KAVHFRVFFW DVANAGYGNI LGFKSFTEKV GKFYWDSARK  660
LQKEILHAQA QGRPCGGDES ELLPDHLASL LELDCDDVLG DEMIQRAWNL AWNKPSAYAL  720
TPHAAKDSVV EDHAIRSPLD AVAAWYANMT VDDTLVEVLG EHHSSLDTEY YIFLAISIAP  780
PASATHVRAL AAKAVLFNRK RESNIIAALE AFPMTAPVIA GNMNLVSHAP ASPDLCMALT  840
LAKLLALLTP NQCLAARKRA HHMLANLHVV PGDFSLLSAV AAYRLLRSSH TDRRMSDAAT  900
QGLEDMAANL RLWIGTSAGR NVGLDAEGCG RVVDLCLAVA RKVGGWEEQD SGYGSAYPSH  960
SASASESDEG GASKGSALRA PEVTSS