PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023876712.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 569aa MW: 65233.9 Da PI: 9.4812

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023876712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.2	2.3e-07	4	42	52	89
FAR1 52 rrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 r+r t+t+C ++ v++ + +gk++v++++ eHnH+l XP_023876712.1 4 TRNRDDTKTNCPVRFYVSLVReSGKFKVSDFVGEHNHTL 42 68999************999*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MIRTRNRDDT KTNCPVRFYV SLVRESGKFK VSDFVGEHNH TLHLSETVYM MRSQRKILEV 60 HAGLIELAPS SGIKPKAAHE LMSRKAGGKA NLGFTELDQK NYLRTKWQKN LITNIFWADA 120 RVVIDYANFG DVVTFDTTYG TNKELRPLGV FTGFNHHRGL TVFGAALLYD ETVESFKWLF 180 ESFLVAHGGK RPKTIFRDQD PTMAKALSEV MPNTYHGLCT WHIMQNGIKH LGNLMKDGSS 240 FLQVFKTCML EFNDENEFEK TWEDMIDTYA IHDRSWLDII YKLKGKWAKC YMKNEFTLGI 300 RSTQLSKSLN GDLKDYLKSD LDVAEFFKHF DRVIKKKREK ELQAEFNARQ KYPQLGLKNS 360 PLLKQAVQVY TPIIPDMYIL KRWTREAKSG SSRAVDNEEA FALIEKMIEE YEKKVEDIAA 420 KNVSGHQLPH QMPLCSGAEN LDPNQHLEDL VERAKGLKKK ECRKGGKRKK SWVEKQTKKK 480 GRVELNDERT YPVTFSPPMM TFELGPIHSY QTSFTSFLRM PLTPLLSQVS NPTDVSQAPL 540 TPSLSQLTPS LSQVSNDAAV CQVNIDFAV

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MIRTRNRDDT KTNCPVRFYV SLVRESGKFK VSDFVGEHNH TLHLSETVYM MRSQRKILEV  60
HAGLIELAPS SGIKPKAAHE LMSRKAGGKA NLGFTELDQK NYLRTKWQKN LITNIFWADA  120
RVVIDYANFG DVVTFDTTYG TNKELRPLGV FTGFNHHRGL TVFGAALLYD ETVESFKWLF  180
ESFLVAHGGK RPKTIFRDQD PTMAKALSEV MPNTYHGLCT WHIMQNGIKH LGNLMKDGSS  240
FLQVFKTCML EFNDENEFEK TWEDMIDTYA IHDRSWLDII YKLKGKWAKC YMKNEFTLGI  300
RSTQLSKSLN GDLKDYLKSD LDVAEFFKHF DRVIKKKREK ELQAEFNARQ KYPQLGLKNS  360
PLLKQAVQVY TPIIPDMYIL KRWTREAKSG SSRAVDNEEA FALIEKMIEE YEKKVEDIAA  420
KNVSGHQLPH QMPLCSGAEN LDPNQHLEDL VERAKGLKKK ECRKGGKRKK SWVEKQTKKK  480
GRVELNDERT YPVTFSPPMM TFELGPIHSY QTSFTSFLRM PLTPLLSQVS NPTDVSQAPL  540
TPSLSQLTPS LSQVSNDAAV CQVNIDFAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-69	FAR1 family protein