PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023876725.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ZF-HD
Protein Properties Length: 257aa    MW: 27479.3 Da    PI: 7.1692
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023876725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer99.23.1e-3158112358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                     k rY+eClkNhA+ lGgha+DGCgEfmp+ g+egt ++lkCaAC+CHRnFHR+e e
  XP_023876725.1  58 KPRYRECLKNHAVGLGGHALDGCGEFMPA-GAEGTLDGLKCAACNCHRNFHRKEGE 112
                     679*************************9.999********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MDFEDQEDHD EEMELGGASY DSLGNSGRVK MQSSGGVLAA SGGGGSGGAE AVTQPSRKPR  60
YRECLKNHAV GLGGHALDGC GEFMPAGAEG TLDGLKCAAC NCHRNFHRKE GEGHGGISTS  120
PASAAAMASG DAYMVPPHHQ FSQYYRTPAG YLVATQQRPL ALPSTSGGGG GHSRDDQDDV  180
SNPSGGSGGY VGTASKKRFR TKFTQEQKER MMELAERLGW RIQKHDEQVV QQFCNETGVK  240
RHVLKVWMHN NKHTLAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.17e-68ZF-HD family protein