PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023876751.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 283aa    MW: 31615.6 Da    PI: 7.7108
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023876751.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.80.00022139171946
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLek 46 
                     Er  Rd+i++ +++Lr ++P +s     K s    L  
  XP_023876751.1 139 ERLSRDQIKQLIHKLRVMVPANS-----KTSVECLLDS 171
                     8888****************983.....4444444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MSQPRKPTSE DRVPEATAST ASIFPPNNSE SSGSAPNETI PQISHSIASV FPPTKSQSES  60
SESNERNLQP QQTHPIQSIF QPTKSHTSSS DSLHNCSSST SIQAHFRSNK LEHSTESIQH  120
STSIRLSEPE RVPLNRVEER LSRDQIKQLI HKLRVMVPAN SKTSVECLLD STKTYINELK  180
GKHQSSECHK EYLQKQLERL VNNINVGIAG RNATILIQCS KNHSPSTLML ALMELELDVY  240
NATWTVVNDL MMLHAVVNME SGFYTQEQLR LALLAKLGLA FFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17880.14e-24bHLH family protein