PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023877239.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 244aa    MW: 28647.8 Da    PI: 4.1688
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023877239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.81.4e-12101342128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykv.ePwdLpkkvkaeek...ewyfFskrdkkyatgkrknratksgyWkatg 87 
                      p+++F P+++el+ +yL++kv g++     +e+  +++e+d+++v eP ++  ++ +e++   ++yfF++++ +++          +  W+   
  XP_023877239.1  10 LPCIKFCPNEDELIYYYLHPKVIGEPlslggVEV-VHVPEFDVFRVkEPDKIWDMIWGEDSapdRVYFFTTASAAQS--------LLETCWRYEA 95 
                     6899**********************55443333.359999**99879*99974443433335588***99987653........3456799887 PP

             NAM  88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + + ++++ +g  + +k+ + +   ++ +++   W+m+ey+l
  XP_023877239.1  96 S-EVIYDEnTGYPIAIKRQFYYE--NHDSPQDGYWIMNEYSL 134
                     7.455554377789999998766..4555569********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MKVYFPSLML PCIKFCPNED ELIYYYLHPK VIGEPLSLGG VEVVHVPEFD VFRVKEPDKI  60
WDMIWGEDSA PDRVYFFTTA SAAQSLLETC WRYEASEVIY DENTGYPIAI KRQFYYENHD  120
SPQDGYWIMN EYSLDVEGSM LLLPSSSHVA CELCKNNLDE IDQNETTAFF DEYQCKTTTY  180
FDEYQNEIAI SFDEDQNETT TYFNEYQNEA TVSFDEDQNK TNSKKKKLPV QLQQCHPRKK  240
QNCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-08NAC family protein