PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023877686.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family Nin-like
Protein Properties Length: 278aa    MW: 30684.4 Da    PI: 10.0157
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023877686.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK72.55.6e-231764249
          RWP-RK  2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
                    +++++++++s+yFslp++dAA++Lgvc++vLK+ CR++G++RWP+Rk 
  XP_023877686.1 17 TASLTFDQISRYFSLPLNDAASTLGVCTSVLKKLCRENGLDRWPYRKF 64
                    689********************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MSSRQNPNPN TNTNTNTASL TFDQISRYFS LPLNDAASTL GVCTSVLKKL CRENGLDRWP  60
YRKFLSGKSI EEIRRYAARE KYKELAELSK NGRESGAQKS NSDMSKSKGA ALPHNLQQQG  120
SKNVQNLRSQ NLLSTSLTKG IAALDEFKYG FPSNGLSTAS NKWWGSSSPN GCEGNLGDRV  180
ETNEDDKHKS EEMVGDSPSV VIVDKEECVT GKEESNIGPQ GTGLLTTVRK RTVEEGREAL  240
KLGVFRGYGI NKIGKRERTL LLRIFKSSLP KQWINGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76350.13e-11Nin-like family protein