PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023877712.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HSF
Protein Properties Length: 201aa    MW: 23387.5 Da    PI: 6.7673
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023877712.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind107.98e-34251252102
                     HHHHHHHHHC.........TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXX CS
    HSF_DNA-bind   2 Flkklyeile.........deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFk 87 
                     Fl+k+y++le         d++ ++++sw+++g+ fvv+ + ef++ +LpkyFkh+nf+SF+RQLn+YgFkk+++++         weFkh++F+
  XP_023877712.1  25 FLSKTYDLLEgvaddedddDDDKRNIVSWNAEGTGFVVWSPAEFSELMLPKYFKHNNFSSFIRQLNTYGFKKTSSKR---------WEFKHEKFQ 110
                     9*********999999988889***************************************************9998.........********* PP

                     XXXXXXXXXXXXXXX CS
    HSF_DNA-bind  88 kgkkellekikrkks 102
                     kg ++ll +i rkk 
  XP_023877712.1 111 KGCRNLLVEITRKKC 125
                     ************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MATNEMELNL LGTSQSPRAR CPAPFLSKTY DLLEGVADDE DDDDDDKRNI VSWNAEGTGF  60
VVWSPAEFSE LMLPKYFKHN NFSSFIRQLN TYGFKKTSSK RWEFKHEKFQ KGCRNLLVEI  120
TRKKCEPSIF PAYLKASEEN TMTAMEENNN HQLLLEENKN LRREKLELQT QIAQFKALES  180
KLLDYLAQCM GNNQNKVRKL C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.19e-37HSF family protein