PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023877759.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 187aa MW: 21229 Da PI: 10.0484

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023877759.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.7	2e-32	108	166	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+v+r ++d+++v++tYeg Hnh+ XP_023877759.1 108 LDDGYRWRKYGQKAVKNSVYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHP 166 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MEGQTSSTPS SLPPNNINPP FLFTPSLDPE IDWISLLSTA QPTGFPSAEN NIKPIMELSG 60 SSNGVVLDHE KGNNNNNNNK EKRKSGGRIK KATRPRFAFQ TRSADDILDD GYRWRKYGQK 120 AVKNSVYPRS YYRCTHHTCN VKKQVQRLSK DTSIVVTTYE GIHNHPCEKL METLTPLLKQ 180 MQFLSRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46130.1	4e-59	WRKY family protein