PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023877826.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 200aa    MW: 22390.5 Da    PI: 9.8673
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023877826.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM134.47.7e-4291381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp Gf F+Ptdeel+++yL+ k eg++  + ++i+evd +k++Pw+Lp  ++vk ++++w+fF++ +++    +r nr+tksgyWk tgkd++++
  XP_023877826.1   9 LPLGFGFSPTDEELINHYLRLKNEGHDSGV-QAIAEVDFCKFDPWELPdlSAVKLGNEQWFFFCELQNA----SRLNRITKSGYWKVTGKDRPIK 98 
                     699************************988.88**************96447888999*******9875....69******************** PP

             NAM  94 sk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     s      +++l+g kktLv+++grap+ge+t+Wv+heyr+
  XP_023877826.1  99 SGksrpsNSSLIGSKKTLVYHTGRAPNGERTSWVVHEYRA 138
                     98666666666***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MAKLSLESLP LGFGFSPTDE ELINHYLRLK NEGHDSGVQA IAEVDFCKFD PWELPDLSAV  60
KLGNEQWFFF CELQNASRLN RITKSGYWKV TGKDRPIKSG KSRPSNSSLI GSKKTLVYHT  120
GRAPNGERTS WVVHEYRAID THQGGFILCR LFNKDLPLTS HRIGSFMSAE TSLDKRVWGR  180
SGVLSLETGA KVSKKSVPGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.22e-59NAC family protein