PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023877856.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 799aa MW: 88093.7 Da PI: 6.7188

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023877856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.2	1.9e-08	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q G++ +++I r+++ + q++++++ + XP_023877856.1 52 AWTRQEEESFFTALRQVGKN-FEKITRRVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 799 aa Download sequence
MQTELQVSLP SESHLHPENR SVQNGDLDVT SSTANYVQPK KPAKRPTRQW AAWTRQEEES 60 FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPALCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LEHQLLKDRR KNVKKRPSQG ENSPPAASST 180 VSNQSRGSGQ DARTIKLVLV DSQNIQKLGS GKTSFKRNVN VGVNRSNNKG DSTNMKPARQ 240 RRKPAGVASS AAYKKWEKAA IAGVSLVADA AEHLERAATD KEVEHDPGAP GQKDSDNVGN 300 VLPPLPTFSQ NFVENNILTS MKLKLQLFPI DDGTRRSLEM DKHNPHLELT LSTRKKISSV 360 LEHLNRKWGN SSIAAGELML FPYGVQRENL VGYQRWTQDS VVSAADVYAV LGRPPVFRLR 420 YGWFSNAELA SAVLQSPTAS CSFLGEQNVN EDNIKGNNIG SAPISAPLAN DRSVDLYEDQ 480 LTSLNEKNDL PPSIDVPSEM NNYNCMGPNS KLAESADPAG NISWNRKEAG DGTVTRQLED 540 LDDLRLGAST AISAGEWADS LTNISIGDLL SGVSHDIDAN CIDQPVAESS QCLQQIPFSC 600 DSFDAAIAAH ISKHQDKMGY QPPMPSHASS IWDAEETCDA FSFKKNLVLR QGDPTLSSVA 660 PPGSCKQTSP TSLEVTGCLV EELPEVEKPV ENPVQGDRMD ESQCDPHILD NSAKDFNTLA 720 DIYWPESLGP LDLDIPSSKY HSEDLILSDS LSGLNRLIAS SLDAFQNCSF FGLDKKESAS 780 AVEAREATSF PNFKIGSGV

Sequence ? help Back to Top

Protein Sequence Length: 799 aa Download sequence

MQTELQVSLP SESHLHPENR SVQNGDLDVT SSTANYVQPK KPAKRPTRQW AAWTRQEEES  60
FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPALCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LEHQLLKDRR KNVKKRPSQG ENSPPAASST  180
VSNQSRGSGQ DARTIKLVLV DSQNIQKLGS GKTSFKRNVN VGVNRSNNKG DSTNMKPARQ  240
RRKPAGVASS AAYKKWEKAA IAGVSLVADA AEHLERAATD KEVEHDPGAP GQKDSDNVGN  300
VLPPLPTFSQ NFVENNILTS MKLKLQLFPI DDGTRRSLEM DKHNPHLELT LSTRKKISSV  360
LEHLNRKWGN SSIAAGELML FPYGVQRENL VGYQRWTQDS VVSAADVYAV LGRPPVFRLR  420
YGWFSNAELA SAVLQSPTAS CSFLGEQNVN EDNIKGNNIG SAPISAPLAN DRSVDLYEDQ  480
LTSLNEKNDL PPSIDVPSEM NNYNCMGPNS KLAESADPAG NISWNRKEAG DGTVTRQLED  540
LDDLRLGAST AISAGEWADS LTNISIGDLL SGVSHDIDAN CIDQPVAESS QCLQQIPFSC  600
DSFDAAIAAH ISKHQDKMGY QPPMPSHASS IWDAEETCDA FSFKKNLVLR QGDPTLSSVA  660
PPGSCKQTSP TSLEVTGCLV EELPEVEKPV ENPVQGDRMD ESQCDPHILD NSAKDFNTLA  720
DIYWPESLGP LDLDIPSSKY HSEDLILSDS LSGLNRLIAS SLDAFQNCSF FGLDKKESAS  780
AVEAREATSF PNFKIGSGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein