PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023879060.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 194aa    MW: 21577.3 Da    PI: 4.8666
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023879060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.36.1e-162272155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr  k+ ++Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a  +l+g
  XP_023879060.1 22 PVYRGVR-SKNPNKWVSEVREP---NKKSRIWLGTFPTAEMAARAHDVATIALRG 72
                    68****9.888*******9998...347*********************999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MLASRNPKKR DGRKKFKETR HPVYRGVRSK NPNKWVSEVR EPNKKSRIWL GTFPTAEMAA  60
RAHDVATIAL RGRYACLNFA DSLWRLPVPT STAAKDIQRA ALEAAEAFRP AELAGVSGDD  120
LMQSSENEAT VEVAAETEIE PEDTSFMDEE AVFGMPELLR NMAEGMLLPP PPPCYGGDNM  180
ETDSSEVSLW SYSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.15e-65ERF family protein