PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023879250.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 249aa MW: 28147.8 Da PI: 8.639

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023879250.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.6e-18	15	61	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+WT+eEd+ll d++k +G + W +ar+ g++R++++c++rw++yl XP_023879250.1 15 GPWTAEEDKLLTDYIKIHGERKWCNVARKAGLKRCGNSCRLRWLNYL 61 89*******************************************97 PP
2	Myb_DNA-binding	49.4	1e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++ E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_023879250.1 67 RGNISPAEEDLIIRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNTVL 112 7899****************.*****.**********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MGRRPRCTKE EMNNGPWTAE EDKLLTDYIK IHGERKWCNV ARKAGLKRCG NSCRLRWLNY 60 LRPDIKRGNI SPAEEDLIIR LHRLLGNRWS LIAGRLPGRT DNEIKNYWNT VLRRKLINGK 120 QHKQNTILGP SNEITSSTTS VSNGAKTNAV KCKKIFETSE SHELETSGSA SNALEELSKE 180 GCFVNDNVVN ESKSKEDCSP NFSSSFNYMD ELLMSGVSGS DFWKLCIFYD NLAGCNNGST 240 SDLLDRHLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	9e-57	MYB family protein