PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023879311.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 392aa MW: 44741 Da PI: 4.8477

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023879311.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.9	5.2e-36	14	105	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+++++++sws+n++sf+v+++ efa+++Lp++Fkh+nf+SF+RQLn+YgF+k++ e+ weF++++F +g+ +ll++ XP_023879311.1 14 FLTKTYEMVDDPSTDSVVSWSANNKSFIVWNPPEFARDLLPRFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFANEEFIRGQPHLLKN 99 9*************************************************************9998.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_023879311.1 100 IHRRKP 105 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MDEGQGGSNS LPPFLTKTYE MVDDPSTDSV VSWSANNKSF IVWNPPEFAR DLLPRFFKHN 60 NFSSFIRQLN TYGFRKIDPE QWEFANEEFI RGQPHLLKNI HRRKPVHSHS LQNLQGQGSA 120 SPMSESERQS LKEEIEGLKR ERERLLLELQ RHEEERRGFE MQVQLYKERL QHVERQQQKM 180 MSSVAQVLRK PGLPLNLVTQ LENHDRKRRL PRIGYIYDEA SIEDTQMGTS QTVPGESGVS 240 ACASTSNVEP FEHVQSSLFV WENLLRDVSE TFMKFNSNPD LDESTSCDES PTISCVQLNV 300 DVRPKSPGID MNSEPATAAV LEPVEPDASK EQGLVTTTVP TGVNDVFWEQ FLTENPGAAD 360 TQEVQSERKE SMAERMKQDL AMMANYSRVS GM

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MDEGQGGSNS LPPFLTKTYE MVDDPSTDSV VSWSANNKSF IVWNPPEFAR DLLPRFFKHN  60
NFSSFIRQLN TYGFRKIDPE QWEFANEEFI RGQPHLLKNI HRRKPVHSHS LQNLQGQGSA  120
SPMSESERQS LKEEIEGLKR ERERLLLELQ RHEEERRGFE MQVQLYKERL QHVERQQQKM  180
MSSVAQVLRK PGLPLNLVTQ LENHDRKRRL PRIGYIYDEA SIEDTQMGTS QTVPGESGVS  240
ACASTSNVEP FEHVQSSLFV WENLLRDVSE TFMKFNSNPD LDESTSCDES PTISCVQLNV  300
DVRPKSPGID MNSEPATAAV LEPVEPDASK EQGLVTTTVP TGVNDVFWEQ FLTENPGAAD  360
TQEVQSERKE SMAERMKQDL AMMANYSRVS GM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	210	DRKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-115	HSF family protein