PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023879503.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 726aa MW: 84901.5 Da PI: 4.9406

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023879503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.5	8.4e-22	117	201	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn YA+e+GF +r+++s ++++++e + ++C++eg++ ++ + ++r+etrtgC a++++++ ++++w+v+++++eHnH++ XP_023879503.1 117 NYYNCYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKMIKEAN-----SRRKETRTGCLAMIRLRLVESNRWRVDEVKHEHNHSFD 201 69**************************************98887.....8999*****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
MTDDTTFSPS DHALSPCPNL DITIEEGSQN SDQLLEHDGD LENDHETEQL FEINGDDHEG 60 NDLENECEQL FEIEGNDLET DRDDTTIVDF QNGVSERKDY PPPVVGMEFE SYDDAYNYYN 120 CYARELGFAI RVKSSWTKRN SKEKRGAVLC CNCEGFKMIK EANSRRKETR TGCLAMIRLR 180 LVESNRWRVD EVKHEHNHSF DPERAQNSKS HKKMVIGDKR KLEPTVDVEV RTIKLYRTPV 240 VDAMGYGSSN SNEGEANNHF DRSRRLKLKN GDAQVIYDYF CRVQLTDPNF FYVMDLNDEG 300 HLRNLFWIDS RSRAAYGYFG DVVALDTTCL SNNYDIPVLA FVGVNHHGQS VLLGCGLLAD 360 ETLETYIWLF RAWLTCMSGR PPQTILTNQC RAMQTAIAEV FPRAHHRFWL PLVMQSMLDS 420 LSEYQEYDAF QTVLRRTVYD SIKVEEFEMA WEDMIQRFGA REHEWLRILY EERERWVPVY 480 SKDTSFAGMS NSEMVGTVSA FFDGYMHQQT SLKEFFHMYE IVLQKKHQKE ALDDLESRDS 540 SDILKTSCYY ELQLSKLYTK EIFQKFQDEV VMMSSCFNIT QAHTNGPVVT YMVKERDGEE 600 ILRDVRNFEV MYDKATAEVR CICSCFNFKG YLCRHALCVL TYNSLEEIPF QYILSRWRKD 660 FKRLYVPDLG SNNVDITNPV QWFDHLYRRA MQVVEEGMIS QDHYMVAWQA FKESLNKVRL 720 VAEKHM

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

MTDDTTFSPS DHALSPCPNL DITIEEGSQN SDQLLEHDGD LENDHETEQL FEINGDDHEG  60
NDLENECEQL FEIEGNDLET DRDDTTIVDF QNGVSERKDY PPPVVGMEFE SYDDAYNYYN  120
CYARELGFAI RVKSSWTKRN SKEKRGAVLC CNCEGFKMIK EANSRRKETR TGCLAMIRLR  180
LVESNRWRVD EVKHEHNHSF DPERAQNSKS HKKMVIGDKR KLEPTVDVEV RTIKLYRTPV  240
VDAMGYGSSN SNEGEANNHF DRSRRLKLKN GDAQVIYDYF CRVQLTDPNF FYVMDLNDEG  300
HLRNLFWIDS RSRAAYGYFG DVVALDTTCL SNNYDIPVLA FVGVNHHGQS VLLGCGLLAD  360
ETLETYIWLF RAWLTCMSGR PPQTILTNQC RAMQTAIAEV FPRAHHRFWL PLVMQSMLDS  420
LSEYQEYDAF QTVLRRTVYD SIKVEEFEMA WEDMIQRFGA REHEWLRILY EERERWVPVY  480
SKDTSFAGMS NSEMVGTVSA FFDGYMHQQT SLKEFFHMYE IVLQKKHQKE ALDDLESRDS  540
SDILKTSCYY ELQLSKLYTK EIFQKFQDEV VMMSSCFNIT QAHTNGPVVT YMVKERDGEE  600
ILRDVRNFEV MYDKATAEVR CICSCFNFKG YLCRHALCVL TYNSLEEIPF QYILSRWRKD  660
FKRLYVPDLG SNNVDITNPV QWFDHLYRRA MQVVEEGMIS QDHYMVAWQA FKESLNKVRL  720
VAEKHM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	0.0	FAR1 family protein