PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023879507.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 1354aa MW: 156555 Da PI: 6.7462

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023879507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.9	2.5e-21	60	143	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a++++++ ++++w++ ++ leHnH l XP_023879507.1 60 NYYNCYAKEAGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMIRMRLVDSKRWRILEVTLEHNHLL 143 69***************************************9988.....99*******************************87 PP
2	FAR1	68.3	1.9e-21	746	828	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn YAk+ GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+++++e eHnH ++ XP_023879507.1 746 FYNCYAKDQGFGVRVSNTWYR-KSKERYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMDSKRWRIIEVEVEHNHLIS 828 9*************99997.66779**********99888.....*********************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1354 aa Download sequence
MEEASLSSEQ VPDNECNEIQ KEEDGVMTEL DYQNGLSEGR KEFVAPAVGM EFESYDDAYN 60 YYNCYAKEAG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RIKDVNRLRK ETRTGCPAMI 120 RMRLVDSKRW RILEVTLEHN HLLGTKVYKS IKKMGSGTKR KSESNSDAEV QTVKLYRALV 180 IDAGGNGGSN INAREVGNFT DHPNQLSLKK GDTQAIYNYL CRMQLANPNF FYLMDLNNEG 240 RLRNVFWVDA RSRAACCYFS DVIYFDNTYL SNKYEIPLVA LVGINHHGQS VLLGCGLLAG 300 ETTESYIWLF KAWLTCMSGR PPQTIITDRC KALQSAIAEM FPRSLHRFGL SHIMKRVPEK 360 LGGLRNYDAI RKAMIKAVYE ALKVIEFETA WVFMVQRFGV GDHEWLRSLY EDRVRWAPVY 420 LKDTFFAGMS AARPGDILNP FFDRYVHKQT PLKEFLDKYE LALHKKHKEE VLADIESRSS 480 SPLLKTRCSF ELQLSKVYTR EIFKKFQYEV EEMYSCFSTT QLHIDGPIVI FLVKERVLGE 540 GNRREIRDYE VLYNRTAGEV RCICSCFNFY GYLCRHALCV LNFNGVEEVP PKYILSRWKK 600 DYKRLYIPDV GSGSVDATDR VQWFNQLYRS ALQVVEEGVI SLDHYNVALQ AFEESLNRVH 660 DVDGRQALPA FEESLNRVHD VESRQEMDEV SLNSEPVGED DADGFEIEGD CAMTEYVGQA 720 GIIQGENPLP PAVGMEFESY EDVYYFYNCY AKDQGFGVRV SNTWYRKSKE RYRGKLSCSS 780 AGFKKKSEAN RPRPETRTGC PAMIKFRLMD SKRWRIIEVE VEHNHLISPK SGKFYKSHKH 840 LGVGTKRALQ LESAEEAQKI RLFRTVVIDA EDNESLDVDE GVFGNNVDYC NQLKLKVGDA 900 QAVINYFTHL QLINPNFFYV VDLNEKGCLR NLFWTDARAR VAYGYFGDVV AIDTTCLTNK 960 YEVPLVSFVG MNHHGQSVLL GCGLLVGETI ESYTWLFRAW LTCMLGRPPQ AIITDQCSTL 1020 QTAVADVFPR ASHCLCLSHI MQKIPEKLEG LYEYEAIIAA LNRAVYHSLR SEEFEAAWED 1080 MMQRHGLRDQ KWLQVLYEDR KRWVPVYLKD TFWAGMFPIQ PSDVVSSFFE GYLDKQTTLK 1140 EFLDKYDQAL QTKHHLEDLA DMNSRNSTYM LKSGSYFELQ LSKLYTNDIL EMFKREVEGM 1200 YSCFSTRQLN ADGPIFTYIV KDQVEVERNR REARDYEVFY NATEMEVLCI CGLFNFKGYL 1260 CRHALSVLNQ NVMEEIPPQY ILSRWRKDIP RNYVLDHSSN GIDANNPVHR YDHLYKCVVQ 1320 VVEEGRKSED RYKLALQALD QILNKLHLVD NQSM

Sequence ? help Back to Top

Protein Sequence Length: 1354 aa Download sequence

MEEASLSSEQ VPDNECNEIQ KEEDGVMTEL DYQNGLSEGR KEFVAPAVGM EFESYDDAYN  60
YYNCYAKEAG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RIKDVNRLRK ETRTGCPAMI  120
RMRLVDSKRW RILEVTLEHN HLLGTKVYKS IKKMGSGTKR KSESNSDAEV QTVKLYRALV  180
IDAGGNGGSN INAREVGNFT DHPNQLSLKK GDTQAIYNYL CRMQLANPNF FYLMDLNNEG  240
RLRNVFWVDA RSRAACCYFS DVIYFDNTYL SNKYEIPLVA LVGINHHGQS VLLGCGLLAG  300
ETTESYIWLF KAWLTCMSGR PPQTIITDRC KALQSAIAEM FPRSLHRFGL SHIMKRVPEK  360
LGGLRNYDAI RKAMIKAVYE ALKVIEFETA WVFMVQRFGV GDHEWLRSLY EDRVRWAPVY  420
LKDTFFAGMS AARPGDILNP FFDRYVHKQT PLKEFLDKYE LALHKKHKEE VLADIESRSS  480
SPLLKTRCSF ELQLSKVYTR EIFKKFQYEV EEMYSCFSTT QLHIDGPIVI FLVKERVLGE  540
GNRREIRDYE VLYNRTAGEV RCICSCFNFY GYLCRHALCV LNFNGVEEVP PKYILSRWKK  600
DYKRLYIPDV GSGSVDATDR VQWFNQLYRS ALQVVEEGVI SLDHYNVALQ AFEESLNRVH  660
DVDGRQALPA FEESLNRVHD VESRQEMDEV SLNSEPVGED DADGFEIEGD CAMTEYVGQA  720
GIIQGENPLP PAVGMEFESY EDVYYFYNCY AKDQGFGVRV SNTWYRKSKE RYRGKLSCSS  780
AGFKKKSEAN RPRPETRTGC PAMIKFRLMD SKRWRIIEVE VEHNHLISPK SGKFYKSHKH  840
LGVGTKRALQ LESAEEAQKI RLFRTVVIDA EDNESLDVDE GVFGNNVDYC NQLKLKVGDA  900
QAVINYFTHL QLINPNFFYV VDLNEKGCLR NLFWTDARAR VAYGYFGDVV AIDTTCLTNK  960
YEVPLVSFVG MNHHGQSVLL GCGLLVGETI ESYTWLFRAW LTCMLGRPPQ AIITDQCSTL  1020
QTAVADVFPR ASHCLCLSHI MQKIPEKLEG LYEYEAIIAA LNRAVYHSLR SEEFEAAWED  1080
MMQRHGLRDQ KWLQVLYEDR KRWVPVYLKD TFWAGMFPIQ PSDVVSSFFE GYLDKQTTLK  1140
EFLDKYDQAL QTKHHLEDLA DMNSRNSTYM LKSGSYFELQ LSKLYTNDIL EMFKREVEGM  1200
YSCFSTRQLN ADGPIFTYIV KDQVEVERNR REARDYEVFY NATEMEVLCI CGLFNFKGYL  1260
CRHALSVLNQ NVMEEIPPQY ILSRWRKDIP RNYVLDHSSN GIDANNPVHR YDHLYKCVVQ  1320
VVEEGRKSED RYKLALQALD QILNKLHLVD NQSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein