PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023879570.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 120aa    MW: 13768.7 Da    PI: 10.6122
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023879570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-1860111156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     + y+GVr +k++ +Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+  l+g+
  XP_023879570.1  60 PVYRGVR-RKNSRKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAITLRGH 111
                     68****9.6779******9998...347*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MDVLRHFSDP QYLMGSDISS SESESDNARM FNLSDEEVML ASKNPKKRGG RKKFKETRHP  60
VYRGVRRKNS RKWVCEVREP NKKSRIWLGT FPTAEMAARA HDVAAITLRG HKACLNFADS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.16e-47ERF family protein