PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023879932.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

ARR-B

Protein Properties

Length: 559aa MW: 62742.8 Da PI: 6.6867

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023879932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.4	1.3e-27	318	372	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++Wt+eLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++ XP_023879932.1 318 KMKVDWTQELHKKFVHAVEQL-GVDHAIPSRILELMKVEGLTRHNVASHLQKYRMH 372 5689***************.9*****************************96 PP
2	Myb_DNA-binding	43.3	8.4e-14	321	370	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023879932.1 321 VDWTQELHKKFVHAVEQLGVDhaIPSRILELMKvEGLTRHNVASHLQKYR 370 57***********************************************7 PP
3	Response_reg	28.2	9.3e-11	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vd + + +e +r+ le +y +v ++ + eal + +k +++ ++ + ++++G+ +k +++++ +lp i+ + +++ +++ G XP_023879932.1 20 VLLVDGDTNSAEEIRSKLEAMDY-IVSTFCNENEALSAILNKPgsFHVAIVEVGTSDSHGS--FKFLETAK-DLPTIMTSNIHCLSTMMKCIAQG 110 89*******************.***********888888*99999988886..77777777.99999999******* PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a +fl Kp ++e+l++ XP_023879932.1 111 AVEFLRKPLSEEKLRN 126 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MVCSANDLQE WKDFPKGLRV LLVDGDTNSA EEIRSKLEAM DYIVSTFCNE NEALSAILNK 60 PGSFHVAIVE VGTSDSHGSF KFLETAKDLP TIMTSNIHCL STMMKCIAQG AVEFLRKPLS 120 EEKLRNIWQH VVHKAFNAGG SNLSESLKPV KESVVSMLQL QLENGEPENR ISMETENESL 180 VHENDKEHSA GSDKYPAPST PQLKQGTRLL DDGDCQDQTN CSIEKESGEQ DGESKSVETT 240 CGDSIGVGTL QEDKLQIPEK NLIKEEEESA DGFKSERKVS HHLHNRDSLS NKGDDCAEKP 300 IKPSQPHNSC GTRANRKKMK VDWTQELHKK FVHAVEQLGV DHAIPSRILE LMKVEGLTRH 360 NVASHLQKYR MHRRHILPKE QERRWPRSRD LMQRNYYQQR PIMAFPPYHS NHTLSPAPIY 420 PVWGQPGIQQ AGAQLWGQPG YPAWQPTNNW HWKPYPGMPA DHAWGCPVVP PTHHPYTSYP 480 QNAAEFHHAG VVDNSCGMPP VDHHPEEEVI DKVVKEAIGK PWLPLPLGLK PPSTDSVLAE 540 LCKQGISTIP PNIKSSKLR

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MVCSANDLQE WKDFPKGLRV LLVDGDTNSA EEIRSKLEAM DYIVSTFCNE NEALSAILNK  60
PGSFHVAIVE VGTSDSHGSF KFLETAKDLP TIMTSNIHCL STMMKCIAQG AVEFLRKPLS  120
EEKLRNIWQH VVHKAFNAGG SNLSESLKPV KESVVSMLQL QLENGEPENR ISMETENESL  180
VHENDKEHSA GSDKYPAPST PQLKQGTRLL DDGDCQDQTN CSIEKESGEQ DGESKSVETT  240
CGDSIGVGTL QEDKLQIPEK NLIKEEEESA DGFKSERKVS HHLHNRDSLS NKGDDCAEKP  300
IKPSQPHNSC GTRANRKKMK VDWTQELHKK FVHAVEQLGV DHAIPSRILE LMKVEGLTRH  360
NVASHLQKYR MHRRHILPKE QERRWPRSRD LMQRNYYQQR PIMAFPPYHS NHTLSPAPIY  420
PVWGQPGIQQ AGAQLWGQPG YPAWQPTNNW HWKPYPGMPA DHAWGCPVVP PTHHPYTSYP  480
QNAAEFHHAG VVDNSCGMPP VDHHPEEEVI DKVVKEAIGK PWLPLPLGLK PPSTDSVLAE  540
LCKQGISTIP PNIKSSKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-156	ARR-B family protein