PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023879962.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 187aa    MW: 21396 Da    PI: 4.6811
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023879962.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM135.14.8e-4281261128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Ptdeelvv++L++k++  +++  +vi+++d+y ++PwdL+ k+ ae ++wyf+s+r         +nr+t +gyWka g++++v+++
  XP_023879962.1   8 LPPGFRFCPTDEELVVHFLHRKASLLPCHP-DVIPDLDLYPYDPWDLDGKALAEGNKWYFYSRRT--------QNRVTCNGYWKAMGNEEPVMNS 93 
                     79*************************999.99**************977778899******984........58******************** PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +++ vg+kk+Lvfy+g+ap+g kt+W+m+eyrl
  XP_023879962.1  94 SSKSVGMKKILVFYTGEAPSGIKTNWIMQEYRL 126
                     *******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MGDNNVNLPP GFRFCPTDEE LVVHFLHRKA SLLPCHPDVI PDLDLYPYDP WDLDGKALAE  60
GNKWYFYSRR TQNRVTCNGY WKAMGNEEPV MNSSSKSVGM KKILVFYTGE APSGIKTNWI  120
MQEYRLSDSA GSTSRSSKRR GHPKIDYSTW VICRVYERDD DDDGTELSCL DEVFLSLDDL  180
DEISLPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.17e-75NAC family protein