PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023880204.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 686aa MW: 78769.8 Da PI: 7.7079

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023880204.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68	2.3e-21	62	155	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+Ak++GFs+r+++++ + + t+r fvC + g++ + ++++k +r+r+++r+gC+a ++++k++ ++w++t + ++HnHel XP_023880204.1 62 EFYSEFAKRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPIKASNESKPQRNRKSSRCGCQAYMRISKTTelgASEWRITGFLNHHNHELL 155 6************9998877356667999*************999****************9988899************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MSEEAGPLLV VYDDPSDQRS LSLDDTSSTE ESPDETRLSL ETTNDAIPYM GQRFATHDAA 60 YEFYSEFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPIKASNE SKPQRNRKSS 120 RCGCQAYMRI SKTTELGASE WRITGFLNHH NHELLEPSQV RFLPAYRTIS DTDKSRILMF 180 AKTGISVHQM MRLMELEKCV EPGYLPFTEK DVRNLLQSFR KLDPEEESID LLRMCRNIKE 240 RDPNFKFEYT LDSNNRLENI TWSYASSVQS YEVFGDAVVF DTTHRLTAID MPLGIWVGMN 300 NYGMPCFFGC VLLREENLRS FSWALKAFLG FMNGKAPQTI LTDQNLCLKE AVAIELPMTK 360 HALCIWMIVG KFPSWFNAVL GERYNEWKTE FFRIYNLESI EDFELGWMEM VNSFGLHANR 420 HIANLYGLRS LWALPFLRTH FFAGMTTNGQ SKSINAFIQR FLSAQTRLAH FVEQAAVAVD 480 FRDQAGEQQT MQQNLQNICL KTGAPMESHA ATILTPFAFS KLQEQLVLAA HYASFQMDDG 540 FLVRHHTKAE GGRKVYWAPR EGIISCSCHH FEFSGILCRH ALRVFSTGNC FQIPDRYLPI 600 RWRRISTPSA KLFQSTPSDH AERIQILQNM VSTLVTESAK SKERLDIANE QISILLSRIK 660 EQPVSLQGMR DVSSIHEVFD SRIYQK

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MSEEAGPLLV VYDDPSDQRS LSLDDTSSTE ESPDETRLSL ETTNDAIPYM GQRFATHDAA  60
YEFYSEFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPIKASNE SKPQRNRKSS  120
RCGCQAYMRI SKTTELGASE WRITGFLNHH NHELLEPSQV RFLPAYRTIS DTDKSRILMF  180
AKTGISVHQM MRLMELEKCV EPGYLPFTEK DVRNLLQSFR KLDPEEESID LLRMCRNIKE  240
RDPNFKFEYT LDSNNRLENI TWSYASSVQS YEVFGDAVVF DTTHRLTAID MPLGIWVGMN  300
NYGMPCFFGC VLLREENLRS FSWALKAFLG FMNGKAPQTI LTDQNLCLKE AVAIELPMTK  360
HALCIWMIVG KFPSWFNAVL GERYNEWKTE FFRIYNLESI EDFELGWMEM VNSFGLHANR  420
HIANLYGLRS LWALPFLRTH FFAGMTTNGQ SKSINAFIQR FLSAQTRLAH FVEQAAVAVD  480
FRDQAGEQQT MQQNLQNICL KTGAPMESHA ATILTPFAFS KLQEQLVLAA HYASFQMDDG  540
FLVRHHTKAE GGRKVYWAPR EGIISCSCHH FEFSGILCRH ALRVFSTGNC FQIPDRYLPI  600
RWRRISTPSA KLFQSTPSDH AERIQILQNM VSTLVTESAK SKERLDIANE QISILLSRIK  660
EQPVSLQGMR DVSSIHEVFD SRIYQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein