PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023880241.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB
Protein Properties Length: 116aa    MW: 13181 Da    PI: 5.5787
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023880241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.72.3e-124889648
                     HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     teEd+l+ ++v++ G++ W  I++ +  gR +kqc++rw+++l
   XP_023880241.1 48 TEEDDLICELVAKQGKKKWCEISKSLL-GRIGKQCRERWHNHL 89
                     8*************************9.*************97 PP
2Myb_DNA-binding22.52.6e-0796116222
                      SSS-HHHHHHHHHHHHHTTTT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg 22 
                       +WT+eE+ +l+da++++G++
   XP_023880241.1  96 TAWTKEEESILIDAHQMYGNK 116
                      68*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MAIMMSSNPG LVTYGSSDEF FESSVAEVEA HNWILEPSAS VLCHECATEE DDLICELVAK  60
QGKKKWCEIS KSLLGRIGKQ CRERWHNHLN PNIKKTAWTK EEESILIDAH QMYGNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02320.23e-30MYB family protein