PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023880333.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

SRS

Protein Properties

Length: 355aa MW: 37609.4 Da PI: 7.1166

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023880333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	227	3.5e-70	122	272	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..aeaaskrkrelkskkqsalsstklssae 95 g++sCqdCGnqakkdC h+RCRtCCksrgfdC+thvkstWvpa+krrerqq + +++++++++ ++ ++++++ ++ s++s ++l+++ XP_023880333.1 122 IGGISCQDCGNQAKKDCIHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQLAVLQQQQQQHQHqlEHRGGEHPKRH-RENPSTSSLARLHTG- 214 5789********************************************8877766666666553333333333333.344555555555555. PP DUF702 96 skkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + le+ ++P+evss+avfrcvrvss+dd ++++aYqtav+igGhvfkGiLydqG+e+ XP_023880333.1 215 -ASGLEVGNFPSEVSSPAVFRCVRVSSIDDTDDQYAYQTAVNIGGHVFKGILYDQGPET 272 .5679999***********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MLTMAGFFSL GGGGGGGGGR GRASSSQEDQ ETNNNPPNEI PPESLFWYKN NEEVSAYKGF 60 ELWQQQEQQV LLQQHQQQQD LYTGLGVGPS RSSINVSDDS SSRSAFMMMR SSSSGGGGGG 120 GIGGISCQDC GNQAKKDCIH MRCRTCCKSR GFDCQTHVKS TWVPASKRRE RQQLAVLQQQ 180 QQQHQHQLEH RGGEHPKRHR ENPSTSSLAR LHTGASGLEV GNFPSEVSSP AVFRCVRVSS 240 IDDTDDQYAY QTAVNIGGHV FKGILYDQGP ETNYSSMGGE SSSGGGGVGG GGGGVQPLNL 300 IAGATTSPTT THGGAAAMVS SAMVSSAMAL LDPSLYPAPL NSFMAGTQFF HPPRS

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MLTMAGFFSL GGGGGGGGGR GRASSSQEDQ ETNNNPPNEI PPESLFWYKN NEEVSAYKGF  60
ELWQQQEQQV LLQQHQQQQD LYTGLGVGPS RSSINVSDDS SSRSAFMMMR SSSSGGGGGG  120
GIGGISCQDC GNQAKKDCIH MRCRTCCKSR GFDCQTHVKS TWVPASKRRE RQQLAVLQQQ  180
QQQHQHQLEH RGGEHPKRHR ENPSTSSLAR LHTGASGLEV GNFPSEVSSP AVFRCVRVSS  240
IDDTDDQYAY QTAVNIGGHV FKGILYDQGP ETNYSSMGGE SSSGGGGVGG GGGGVQPLNL  300
IAGATTSPTT THGGAAAMVS SAMVSSAMAL LDPSLYPAPL NSFMAGTQFF HPPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	2e-68	SRS family protein