PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023880334.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

SRS

Protein Properties

Length: 352aa MW: 37394.2 Da PI: 7.1166

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023880334.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	223.6	3.8e-69	122	269	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 g++sCqdCGnqakkdC h+RCRtCCksrgfdC+thvkstWvpa+krrerqq + ++++++++++ ++ ++ + +++++ s+++l a + XP_023880334.1 122 IGGISCQDCGNQAKKDCIHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQLAVLQQQQQQHQHQLEHRGGEHPK--RHRENPSTSSL--ARLH 212 5789********************************************88766665555554433332222222..22333333333..3345 PP DUF702 98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + le+ ++P+evss+avfrcvrvss+dd ++++aYqtav+igGhvfkGiLydqG+e+ XP_023880334.1 213 TGLEVGNFPSEVSSPAVFRCVRVSSIDDTDDQYAYQTAVNIGGHVFKGILYDQGPET 269 568999***********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MLTMAGFFSL GGGGGGGGGR GRASSSQEDQ ETNNNPPNEI PPESLFWYKN NEEVSAYKGF 60 ELWQQQEQQV LLQQHQQQQD LYTGLGVGPS RSSINVSDDS SSRSAFMMMR SSSSGGGGGG 120 GIGGISCQDC GNQAKKDCIH MRCRTCCKSR GFDCQTHVKS TWVPASKRRE RQQLAVLQQQ 180 QQQHQHQLEH RGGEHPKRHR ENPSTSSLAR LHTGLEVGNF PSEVSSPAVF RCVRVSSIDD 240 TDDQYAYQTA VNIGGHVFKG ILYDQGPETN YSSMGGESSS GGGGVGGGGG GVQPLNLIAG 300 ATTSPTTTHG GAAAMVSSAM VSSAMALLDP SLYPAPLNSF MAGTQFFHPP RS

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MLTMAGFFSL GGGGGGGGGR GRASSSQEDQ ETNNNPPNEI PPESLFWYKN NEEVSAYKGF  60
ELWQQQEQQV LLQQHQQQQD LYTGLGVGPS RSSINVSDDS SSRSAFMMMR SSSSGGGGGG  120
GIGGISCQDC GNQAKKDCIH MRCRTCCKSR GFDCQTHVKS TWVPASKRRE RQQLAVLQQQ  180
QQQHQHQLEH RGGEHPKRHR ENPSTSSLAR LHTGLEVGNF PSEVSSPAVF RCVRVSSIDD  240
TDDQYAYQTA VNIGGHVFKG ILYDQGPETN YSSMGGESSS GGGGVGGGGG GVQPLNLIAG  300
ATTSPTTTHG GAAAMVSSAM VSSAMALLDP SLYPAPLNSF MAGTQFFHPP RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	2e-69	SRS family protein