PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023880779.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NF-YB

Protein Properties

Length: 243aa MW: 26547.7 Da PI: 5.6249

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023880779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	170.8	1.5e-53	64	159	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 reqd+++Pianv+rim+++lP++akis+daket+qecvse+isf+t+ea+++cqre+rkt++++d+lwa+++lGf+dyvepl+vyl++yre+e+e XP_023880779.1 64 REQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYVEPLTVYLNRYREAENE 158 89*******************************************************************************************98 PP NF-YB 97 k 97 + XP_023880779.1 159 R 159 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MSVQCCVCFI SAPRLVLPVN PNSNIPDFIT NIDTNNANAN LNVDANANAN TSNGNQRAHP 60 CIIREQDQYM PIANVIRIMR RILPSHAKIS DDAKETIQEC VSEYISFITG EANERCQREQ 120 RKTVTAEDVL WAMGKLGFDD YVEPLTVYLN RYREAENERN NLRVDQLPYV GFKRSMDYGP 180 VGGPPGPPPY GPGFPMAHHP AMFDASAMGG GYHNGSGAGG SSSSSAGAQN SGLPSFDPYA 240 QFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	6e-56	NF-YB family protein