PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023881215.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 541aa MW: 59283.4 Da PI: 6.6399

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023881215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.8	8e-13	295	397	1	48
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC..........................................................TTS-STC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas.......................................................kapskKlsK 40 rr++hn +ErrRRd+iN++++ L l+P+ +++k ++K XP_023881215.1 295 RRESHNLVERRRRDNINERIQDLGGLVPQHRledekvrkhlqtnsplsptianasgmsppattslfangqtrraagsgnitqglpmEEKDKGPNK 389 8****************************655999999999999999999999999999999999999999999999999999996666666999 PP HHHHHHHH CS HLH 41 aeiLekAv 48 +iL v XP_023881215.1 390 GDILNGSV 397 99998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MTSSPCIKSE PNDYNQFDPG TYMTYGDGHN QNQQHFNSSG NGTGNMNINP ANLSNGSNMS 60 QGFGQNNMSS SFIMGNSGIA DDELIDLDLN QAQQANNNNN QHLDFNQGMH NFFPQQHNSA 120 FSHTPDAPIH SPFNSANNMT AFRQFGGHSM PQPNGVYRTH MHRLDRTVSD SRSPTTPNIS 180 SVSHMQIGDD FSRPGMLRIQ HQRQPSSVGG AGWESTPSGH SWNDNSPFPS PNGHQIHVGI 240 SEVLKNNNNA NNNNSNGDST AHHKVVSSLP TKIEGGATAP VVPQYHSPEA KRRRRRESHN 300 LVERRRRDNI NERIQDLGGL VPQHRLEDEK VRKHLQTNSP LSPTIANASG MSPPATTSLF 360 ANGQTRRAAG SGNITQGLPM EEKDKGPNKG DILNGSVAWT RDLMWYTHLK LQQEQELKDY 420 ITSLGGSWPF QQDDVERRMH SEICEILNKH ASQGGFTAYS RAPGSGLRVP GFTNVAGESV 480 SGGDNLGAAA FSEYPQQQQA TSPGFQSGGS GMSSGQMNHQ AHFWDGGNFK EEDEYGMDDL 540 Q

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MTSSPCIKSE PNDYNQFDPG TYMTYGDGHN QNQQHFNSSG NGTGNMNINP ANLSNGSNMS  60
QGFGQNNMSS SFIMGNSGIA DDELIDLDLN QAQQANNNNN QHLDFNQGMH NFFPQQHNSA  120
FSHTPDAPIH SPFNSANNMT AFRQFGGHSM PQPNGVYRTH MHRLDRTVSD SRSPTTPNIS  180
SVSHMQIGDD FSRPGMLRIQ HQRQPSSVGG AGWESTPSGH SWNDNSPFPS PNGHQIHVGI  240
SEVLKNNNNA NNNNSNGDST AHHKVVSSLP TKIEGGATAP VVPQYHSPEA KRRRRRESHN  300
LVERRRRDNI NERIQDLGGL VPQHRLEDEK VRKHLQTNSP LSPTIANASG MSPPATTSLF  360
ANGQTRRAAG SGNITQGLPM EEKDKGPNKG DILNGSVAWT RDLMWYTHLK LQQEQELKDY  420
ITSLGGSWPF QQDDVERRMH SEICEILNKH ASQGGFTAYS RAPGSGLRVP GFTNVAGESV  480
SGGDNLGAAA FSEYPQQQQA TSPGFQSGGS GMSSGQMNHQ AHFWDGGNFK EEDEYGMDDL  540
Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	291	296	KRRRRR
2	291	307	KRRRRRESHNLVERRRR
3	292	308	KRRRRRESHNLVERRRR
4	293	309	KRRRRRESHNLVERRRR
5	295	307	RRESHNLVERRRR
6	296	308	RRESHNLVERRRR
7	303	308	ERRRRD