PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023881389.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 226aa    MW: 24588.4 Da    PI: 9.2634
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023881389.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.66.5e-1374118655
             AP2   6 VrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        ++++g+Wv+eIr p+    + +r++lg++ t ++Aa a++ a+++l+g
  XP_023881389.1  74 A--RSRSGKWVSEIRQPR----KaTRIWLGTYPTRDMAATAYDVAALALKG 118
                     5..5789*********84....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAKNPNVRRN NPYRTANVRR EEETLNSNTT ATISTSTSTI TTATSPISVS EGFSGEPGSS  60
SSSTTAKQKK FRGARSRSGK WVSEIRQPRK ATRIWLGTYP TRDMAATAYD VAALALKGPD  120
TVLNFPDQIL WYPIPLSMSP VDIRAAAASA AEKMMKRSSG SSHEATHLRS TEEGYFIDEE  180
ELLNMPSLLV NMAEGMLLTP PRIQSKSSSD EPGGDGNGDG LWSYSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-38ERF family protein