PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023881641.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 328aa    MW: 35945.9 Da    PI: 5.4191
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023881641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.51.8e-16152198455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn+ E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  XP_023881641.1 152 VHNMSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 198
                     6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MDLYGTTVPS SSVQSIAPES EDIYTFLNQF LHHNSSSASS SSSSCMGYTS KYMYSQPSHA  60
QSMFLKAAGS ENRSESECRV ARDGNSGVAI ESSYGVVFSD PRADIKESNE NTSENNIGDF  120
SCDSEKGPEG SEVPEKPVPP RSSSKRSRAA EVHNMSEKRR RSRINEKMKA LQNLIPNSNK  180
TDKASMLDEA IEYLKQLQLQ VQMLSMRNGL SLHPMCLPGV LQPIQLPQPG MSFDERNGCL  240
NSSRGMGTFF GNEERLRQSA SNLPNQCTLS NQPFVIPSAT NITISETSIG SIIPLVLQSN  300
QLIDESAQAH YNTLNLPSSQ EIRSDGTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.14e-39bHLH family protein