PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023881642.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 327aa    MW: 35817.8 Da    PI: 5.213
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023881642.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.51.8e-16151197455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn+ E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  XP_023881642.1 151 VHNMSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 197
                     6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MDLYGTTVPS SSVQSIAPES EDIYTFLNQF LHHNSSSASS SSSSCMGYTS KYMYSQPSHA  60
QSMFLKAAGS ENRSESECRV ARDGNSGVAI ESSYGVVFSD PRADIKESNE NTSENNIGDF  120
SCDSEGPEGS EVPEKPVPPR SSSKRSRAAE VHNMSEKRRR SRINEKMKAL QNLIPNSNKT  180
DKASMLDEAI EYLKQLQLQV QMLSMRNGLS LHPMCLPGVL QPIQLPQPGM SFDERNGCLN  240
SSRGMGTFFG NEERLRQSAS NLPNQCTLSN QPFVIPSATN ITISETSIGS IIPLVLQSNQ  300
LIDESAQAHY NTLNLPSSQE IRSDGTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.16e-39bHLH family protein