PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023881785.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 265aa MW: 30053.5 Da PI: 8.3357

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023881785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	9.8e-17	20	65	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l +v+q+G+ +W+ Ia ++ gR++k+c++rw++ XP_023881785.1 20 RGHWKPAEDEKLQLLVEQHGPQNWNFIADHLE-GRSGKSCRLRWYNQ 65 899***************************.**********96 PP
2	Myb_DNA-binding	48.1	2.7e-15	72	114	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++TteE+++l+ a++ +G++ W+ Iar++ gRt++ +k+ ++ XP_023881785.1 72 KNPFTTEEEQRLLAAHQIYGNK-WSFIARYFK-GRTDNTVKNQYH 114 689*****************.****9.*******996 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MKKSRSSISS DSESGKICYR GHWKPAEDEK LQLLVEQHGP QNWNFIADHL EGRSGKSCRL 60 RWYNQLDPNI NKNPFTTEEE QRLLAAHQIY GNKWSFIARY FKGRTDNTVK NQYHIMMARR 120 KRERFSVQGH RSHSKFQNLQ KLGTSSMSSL HSLSFSQSTM TTDSFSVDIF GGGRKKDLGP 180 SISSCANDYE PSHGIPVVHE VVPQSFKFSN FAGVYESEEM LNVEGLDDNS NACWNLKMAS 240 DQDQGDGSIT HKAVPFIDFF GVGIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33450.1	5e-58	MYB family protein