PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023882045.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 233aa    MW: 25890.4 Da    PI: 6.2618
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023882045.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.53.8e-18146180135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C + kTp+WR gp g+ktLCnaCG+++++ +l
  XP_023882045.1 146 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL 180
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MDVYGGGVSS TADSNFPIDD LLDFSNDQLF SSSSSSSTDS DVTATQNYLP TPHSLSHAQP  60
IVNNGLNYHH HLSTDFTNDL CAVPSDDVAE LEWLSQFVDD SFTDFSTVEL AGEMAFRSDA  120
SPEAGKTKQK SGERGSPAEG GEVRRCTHCA SEKTPQWRTG PLGPKTLCNA CGVRFKSGRL  180
VPEYRPAASP TFVLTQHSNS HRKVMELRRQ KELTREQQQE QMYHHHHHHR QVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.16e-66GATA family protein