PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023882156.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 256aa MW: 28950.5 Da PI: 9.6025

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023882156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.1	2.4e-51	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+evd++k++PwdLp e+e y+Fs+r+ ky++g+r+nrat sgyWkatg dk+++++ XP_023882156.1 14 LPPGFRFHPTDEELVVQYLKRKVFSCPLPA-SIIPEVDVCKFDPWDLPGD---LEQERYYFSTREAKYPNGNRSNRATGSGYWKATGLDKQIVTS 104 79**************************.89***********54...46799*****************************9998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfy+g+ p+g++tdW+mheyr+ XP_023882156.1 105 rGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRF 138 57778*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MEKLNFVKNG VLRLPPGFRF HPTDEELVVQ YLKRKVFSCP LPASIIPEVD VCKFDPWDLP 60 GDLEQERYYF STREAKYPNG NRSNRATGSG YWKATGLDKQ IVTSRGNQVV GMKKTLVFYR 120 GKPPHGSRTD WIMHEYRFVT AENSPSNAPQ KKTSTESSVV PMENWVLCRI FLKKRSNKSE 180 DDNVQTGNEN TVGKPRTAKP VFYDFMTKGR TDLNVAPASS SSGSSGVTEV SSNESDHEES 240 SSCNSFPYFR RKPNSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-100	NAC family protein