PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023882398.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 220aa    MW: 24321.8 Da    PI: 5.1733
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023882398.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.00016991123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_023882398.1 69 YTCTFCRREFRSAQALGGHMNVH 91
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MAAELGLLSL TQLQKLSQSQ QNQHQLNTSA WMWNQKQAQQ QEDDESWEVK AFAEDTGNIL  60
GTTWPPRSYT CTFCRREFRS AQALGGHMNV HRRDRARLHQ AQPNSGNIPT SSPNSNTPFI  120
IPTQEFLANG GGLCLLYQLP NYNAAAFTTS TPINSTTCLD QSPSTLLSIS PDASPPTNFP  180
LGTQPGTNSS SSYYSPTTDN YNNTEDLDLE LRLGQRPMPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.14e-41C2H2 family protein