PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023882715.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GRAS
Protein Properties Length: 223aa    MW: 24771.9 Da    PI: 4.6805
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023882715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS29.31e-09149202154
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarla 54 
                     lv+lL+ cAeav+ +d + a+alL++l+  a   g+++qR+ ++f+++La+rl 
  XP_023882715.1 149 LVRLLFGCAEAVACRDRSHASALLSQLRACALFFGSSFQRVPSCFVKGLAERLC 202
                     6899************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MAPPLCLNQF YNNESYEVVS AHNMCLSARA CYPYQYLPIS DNSDSTLDLP FPEETRDRKK  60
LKRSISIADS MDSYSSQSSD GINFCTYNRP SISRTGSFNN LSKLQFRDHI WTCNQRYLAA  120
EAVEEAAEAI INAEESDPEE DESADGMRLV RLLFGCAEAV ACRDRSHASA LLSQLRACAL  180
FFGSSFQRVP SCFVKGLAER LCLVQPLGGG LGFATPPMMN IMD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.13e-07GRAS family protein