PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023882856.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family LBD
Protein Properties Length: 114aa    MW: 12365.9 Da    PI: 7.979
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023882856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26035.52.8e-113784148
          DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllka 48
                    +CaaC + rr+ a++C+lapyfp ++p+k   +h+ FGasn +++ ++
  XP_023882856.1 37 PCAACNIFRRTRAEKCPLAPYFPCTEPAKVTTAHRSFGASNTINFFQT 84
                    7*******************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MEASIDTNTS TTSSTPISHS PPSPYSPPPP VAFVKGPCAA CNIFRRTRAE KCPLAPYFPC  60
TEPAKVTTAH RSFGASNTIN FFQTQECIEF NCPRNENAST CFICINRSIS TTNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.12e-18LBD family protein