PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023882909.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 332aa    MW: 37047 Da    PI: 6.1868
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023882909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-09245288755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  XP_023882909.1 245 IAAKNRRERISERLKVLQELVPNG-----SKVDLVTMLEKAISYVKFLQ 288
                     5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MALAKDRMLH DSCMGSVHQL VPDLSSPGPN YAVDDDECNK VALQEVAGLE SAGYVKNVGV  60
NSNAFVFRAT NYQPAHEEAH SLINFKNGYG NGSFMHSTCE SLLSFEQTER SSRNSFLKTN  120
NHKEEYSMWE GNFSDQSYQR NEISSKCSSD PRLLAEFNCF QTASNYSSIT STTTKENQHE  180
DGAYGWLYSE EPVDNDSIQE SATHETSFHK RPHMGESTQA SKKQFTNANK KPKPKTSSSK  240
DPQSIAAKNR RERISERLKV LQELVPNGSK VDLVTMLEKA ISYVKFLQLQ VKVLATDEFW  300
PAQGGKAPDI SQVKEAIDAI LCSQRDTDSS SK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.19e-61bHLH family protein