PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023883107.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YC
Protein Properties Length: 207aa    MW: 22720.3 Da    PI: 6.0233
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023883107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC44.82.8e-14451282099
           NF-YC  20 elPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaee....nkrrtlkksdiaaavtrtdifdflvdivprd 99 
                        +ar+kki+ ad +++  s++   l++ a e+f+ +l  +s++  ++    + rr ++  d+a+av+r +  +fl+d+vp+ 
  XP_023883107.1  45 YWTVARVKKIIHADSEISNCSTNGAFLITVAAEMFLQHLVEQSYNIVKSertsKPRRNIQYRDVANAVARVENLEFLTDVVPKT 128
                     4579***************************************97654311114599*************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MGLQCMVNNV QPPQTVDHFD ANASAKVHYN EVASPYDGTA QHHDYWTVAR VKKIIHADSE  60
ISNCSTNGAF LITVAAEMFL QHLVEQSYNI VKSERTSKPR RNIQYRDVAN AVARVENLEF  120
LTDVVPKTIT YKQYKDKVAK KAIVESGGGS SQGTLDKHME GVEHAAFSGQ NGGNAGAHTA  180
MEIDNVDGQD VDEDVVIMSS KNRIEGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.34e-12NF-YC family protein