PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023883147.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 206aa    MW: 23304.4 Da    PI: 8.5066
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023883147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.0015130147521
                     TTT.EEESSHHHHHHHHH CS
         zf-C2H2   5 dCg.ksFsrksnLkrHir 21 
                      C+ ++Fs+ +n++rH+r
  XP_023883147.1 130 GCNgRRFSSVENYRRHMR 147
                     7888*************9 PP
2zf-C2H221.65.9e-07156175221
                     EETTTTEEESSHHHHHHHHH CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                     +C  C++sF+r+snL++H+r
  XP_023883147.1 156 RCAFCNTSFTRNSNLMQHLR 175
                     8*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MDKFQHYYHP SLVDQHLVFG AAGTVPRDGS KPHTLDRFDP MASPSVPPNL QTIQCELNAF  60
HPSSLEWQSM APAMMPPSHQ PLQQTPQMAS GVTRGPVITS PSMHDQEHRE SSACKCGKKP  120
PPSLMCFEHG CNGRRFSSVE NYRRHMREKN VQRFLRCAFC NTSFTRNSNL MQHLRQGKCQ  180
EARQICNDLT DMSGNHFGTV SPQGYF