PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023883271.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 691aa MW: 80134.3 Da PI: 6.3194

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023883271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.7	5.8e-21	68	159	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g i+kr+fvC+++g++ +kk +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel XP_023883271.1 68 EYYGNFARKNGFSIRKERSRLSPQLG-IYKRDFVCYRSGFAPAKKKPIGEHHRDRKSVRCGCDAKMYLSKEIvegVSQWFVVQFSNVHNHELL 159 59******************8888.**************************************998767889***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 691 aa Download sequence
MTSLPSKNIW IRRQQCPCGD WKCYVSYEGD AEETSIASQL VKNDMVPSES MVAPYVGMVF 60 KSDDDAFEYY GNFARKNGFS IRKERSRLSP QLGIYKRDFV CYRSGFAPAK KKPIGEHHRD 120 RKSVRCGCDA KMYLSKEIVE GVSQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER 180 ILLLSKAGFP IHRIVKVLEL EKGIQGGHLP FLERDVRNFV QNRKKVVQEN DALLTEKREN 240 DTLELLEACK TTKETDEDFV YDFSVDENDK VENIAWSYGD SVHAYTMFGD VVYFDTTYRS 300 ITYGMLFGAW LGIDNHGRTI FFGCVLLQDE TSRSFSWALQ TFVRFMRGRC PQTILTDLDP 360 GLIDAIRSEL PNTKHVTSIW NIISKLPSWF SILLGSRYAE FKSEFDVLYH VDTVDEFDLR 420 WNQMLSMFGL GSDKHIALLF SFRASWALSY MRGYFLARMA TTAYSKSVDS FLKGVFSAQT 480 CLRSFFEQVG ISANFQNHAH LAMQYMRIKT CIPIEDHARS ILTPFAFNAL QNELVMTMQY 540 ATSEMANGSY IVRHFKKMDG EHLVIWIPED EQIHCSCKEF ESSGILCRHA LKILIVKNYF 600 HLPDKYFLSR WRRESSPVIY EDNCTQNGED EWFQEYHCLT ETLFSESSIT KERSDYVRIE 660 LTKELTRLLN EVRNLPEIDG VAMDLTLSPT C

Sequence ? help Back to Top

Protein Sequence Length: 691 aa Download sequence

MTSLPSKNIW IRRQQCPCGD WKCYVSYEGD AEETSIASQL VKNDMVPSES MVAPYVGMVF  60
KSDDDAFEYY GNFARKNGFS IRKERSRLSP QLGIYKRDFV CYRSGFAPAK KKPIGEHHRD  120
RKSVRCGCDA KMYLSKEIVE GVSQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER  180
ILLLSKAGFP IHRIVKVLEL EKGIQGGHLP FLERDVRNFV QNRKKVVQEN DALLTEKREN  240
DTLELLEACK TTKETDEDFV YDFSVDENDK VENIAWSYGD SVHAYTMFGD VVYFDTTYRS  300
ITYGMLFGAW LGIDNHGRTI FFGCVLLQDE TSRSFSWALQ TFVRFMRGRC PQTILTDLDP  360
GLIDAIRSEL PNTKHVTSIW NIISKLPSWF SILLGSRYAE FKSEFDVLYH VDTVDEFDLR  420
WNQMLSMFGL GSDKHIALLF SFRASWALSY MRGYFLARMA TTAYSKSVDS FLKGVFSAQT  480
CLRSFFEQVG ISANFQNHAH LAMQYMRIKT CIPIEDHARS ILTPFAFNAL QNELVMTMQY  540
ATSEMANGSY IVRHFKKMDG EHLVIWIPED EQIHCSCKEF ESSGILCRHA LKILIVKNYF  600
HLPDKYFLSR WRRESSPVIY EDNCTQNGED EWFQEYHCLT ETLFSESSIT KERSDYVRIE  660
LTKELTRLLN EVRNLPEIDG VAMDLTLSPT C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein