PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023883351.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YB
Protein Properties Length: 148aa    MW: 16783.8 Da    PI: 6.7795
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023883351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB148.71.2e-46395395
           NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95
                    +++ +lPianv+rimk++lP  akisk+ak+t+qec++efisfvt+easdkc++e+rkt+ngd ++wa++tlGf++y+e++  yl kyre+e+
  XP_023883351.1  3 DEEILLPIANVGRIMKQILPPTAKISKKAKQTMQECATEFISFVTAEASDKCHKENRKTVNGDGICWAFSTLGFDNYAEAIVRYLYKYREAER 95
                    67889*************************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MDDEEILLPI ANVGRIMKQI LPPTAKISKK AKQTMQECAT EFISFVTAEA SDKCHKENRK  60
TVNGDGICWA FSTLGFDNYA EAIVRYLYKY REAERLKANQ NKGNSTPDNH EEESNYRSGG  120
QHGRQTELPI PLEFRAMERG DNSQARPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09030.12e-60NF-YB family protein