PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023883382.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NF-YB

Protein Properties

Length: 148aa MW: 16783.8 Da PI: 6.7795

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023883382.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	148.7	1.2e-46	3	95	3	95
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 +++ +lPianv+rimk++lP akisk+ak+t+qec++efisfvt+easdkc++e+rkt+ngd ++wa++tlGf++y+e++ yl kyre+e+ XP_023883382.1 3 DEEILLPIANVGRIMKQILPPTAKISKKAKQTMQECATEFISFVTAEASDKCHKENRKTVNGDGICWAFSTLGFDNYAEAIVRYLYKYREAER 95 67889*************************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 148 aa Download sequence
MDDEEILLPI ANVGRIMKQI LPPTAKISKK AKQTMQECAT EFISFVTAEA SDKCHKENRK 60 TVNGDGICWA FSTLGFDNYA EAIVRYLYKY REAERLKANQ NKGNSTPDNH EEESNYRSGG 120 QHGRQTELPI PLEFRAMERG DNSQARPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09030.1	2e-60	NF-YB family protein