PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023883393.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

ARR-B

Protein Properties

Length: 233aa MW: 25806.2 Da PI: 4.9815

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023883393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	30.8	6.4e-10	97	129	26	55
G2-like 26 kAtPktilelmk...vkgLtlehvkSHLQkYRl 55 kAtP +il+ mk v++Lt+ehv S LQkYR XP_023883393.1 97 KATPNKILNRMKaqgVQCLTREHVSSYLQKYRK 129 8********7333677************6 PP
2	Response_reg	38.9	4.6e-14	21	100	1	79
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH...ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd...pDlillDiempgmdGlellkeireeepklpiivvta 79 vlivd++ ++ll+++l++ +y eva + g++al llk+++ +D+il+ +p+md ++ll ++ ++ +lp+i t XP_023883393.1 21 VLIVDENLESLHLLETMLKQCDY-EVAKCNRGKDALSLLKNSRsntFDIILTERCLPDMDEITLLGKLSKAT-DLPVIKATP 100 8********************.***********9999999********************8887.899998773 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MKSALEKSDN TSCEFPAGMR VLIVDENLES LHLLETMLKQ CDYEVAKCNR GKDALSLLKN 60 SRSNTFDIIL TERCLPDMDE ITLLGKLSKA TDLPVIKATP NKILNRMKAQ GVQCLTREHV 120 SSYLQKYRKK QLSGNDEVLN TKQLELSNIG TQAVRNVAFH DRSSITEGST IYGNRSDTFM 180 AENVAAMGGK GPTYFPALEL SNHDNFLGDN PGDSAGINLD QLDDILVDYD ANI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.1	8e-20	ARR-B family protein