PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023883449.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 278aa    MW: 31524.9 Da    PI: 7.4993
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023883449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.24e-051702081154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     rR +++ +++  L++l+ +      +K + a++L++A  YIk L
  XP_023883449.1 170 RRSQKLSDKITALQKLVSPY-----GKTDTASVLQEASLYIKLL 208
                     7999**************99.....9****************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MRNALLQPMS SQLHSFGINQ VQVPNLDVSM AMPMDSEVNV HGSGFCENQL LGNECFTVPF  60
GSPINYSYES GYQSGGTSIC TDIPQQLMLL SQKPSIPQSE EYLQTMPNAR KRPIEVNDLL  120
PKTGTDILDN MMELKEWKRN KTTTTEKQWQ HQVRGAPTQI QEQRLHVPVR RSQKLSDKIT  180
ALQKLVSPYG KTDTASVLQE ASLYIKLLHE QIQNLFQLLS SSYKSSSQQP QEIGEQLNLR  240
SKGLCLVPVS ITQRVKMESP FDHDDLCWKP ITQSYRNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.12e-18bHLH family protein