PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023883504.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CAMTA

Protein Properties

Length: 1086aa MW: 122056 Da PI: 5.8405

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023883504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	181.8	7.8e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ ++rwl++ ei++iL n++k+++++e++ rp sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fqr XP_023883504.1 20 TEAQNRWLRPAEICEILRNYQKFQIASEPPYRPISGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQR 114 4559***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Le++l +iv+vhylevk XP_023883504.1 115 RSYWMLEQDLMHIVFVHYLEVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1086 aa Download sequence
MAERGSYGLP PRLDIKHILT EAQNRWLRPA EICEILRNYQ KFQIASEPPY RPISGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH CYYAHGEENE NFQRRSYWML 120 EQDLMHIVFV HYLEVKGSRT NIGGIKESDE VTSTFQKDSP LSSSFSPNHN RVPCGSTDSP 180 SPASSLTSLY EDGDSEDVFQ ASSTSRSFLE SQPTENGPLR DRTDAGVLNS YFPHPSPDDH 240 GLSSANYISH VWTDRSREND DITSPKTIDL ASWEEVLEHS TRGFHSTVPS NVSSSSSQPA 300 SIGVVLEEEN MTLGGFLASG SVVKEEFQNF VPIQSNWQIP LGDNSVNLPI WPTDQSSHLE 360 LAYDPGTTLV DPKAHDTIMR NGTELLSTHP VQQNEQPVQN KHQIELTNTE SQSSIKSISK 420 MDMPAEGNIN YASTLKKHLI DGEQGLKKVD SFSRWASKEL GDVDDFHMQT SSGISWSTVE 480 CGNVVDDSSL SPSISQDQFF SIIDFSPKWA YTDSENEVLI IGKFLKSLPE IAKCNWSCMF 540 GEVEVPAEVL AIGVLCCHAP PHSVGRVPFY VTCSNRLACS EVREFDYRVG SIKDIDIAVI 600 YGGATTEMLL HMRLERLLSL ISVGPPSHFV EGVPEKRELI SKVISLKEEE EYYQMAEPIS 660 QNDPSQYEVK EHLLKILMKE KLYSWLLHKV SEDGKGPSVL DDEGQGVLHL AAALGYDWAI 720 KPIVTSGVSI NFRDINGWTA LHWAAYCGRE QTVGFLVSLG ASPGALTDPS PEFPLGRTPA 780 DLAGVNGHKG ISGFLAEHLL TSYLKSLEMN DPNEVRTEVS GQNVSEQTVT PANYGDIPEA 840 LSLRDSLTAV SNATLAADRI HLMFRMHSLE RRRITEYDDD IVRLSDEHAL SVVAAKTRKA 900 KQSDGVVHAA ATQIQKKFRG WKKRKEFLII RQRIVKIQAH VRGHQVRKKY RTIIWSVGIL 960 EKVILRWRRK GIGLRGFRSD ARTEDPKPQD VPSKEDDYDF LKDGRKQTEE RLKKALTRVK 1020 SMVQYPEARA QYSRLRTAVE GFRETKAYNL VLNSSEETVV ADEDLIDIDT LLEDVEDDSF 1080 MSMAFE

Sequence ? help Back to Top

Protein Sequence Length: 1086 aa Download sequence

MAERGSYGLP PRLDIKHILT EAQNRWLRPA EICEILRNYQ KFQIASEPPY RPISGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH CYYAHGEENE NFQRRSYWML  120
EQDLMHIVFV HYLEVKGSRT NIGGIKESDE VTSTFQKDSP LSSSFSPNHN RVPCGSTDSP  180
SPASSLTSLY EDGDSEDVFQ ASSTSRSFLE SQPTENGPLR DRTDAGVLNS YFPHPSPDDH  240
GLSSANYISH VWTDRSREND DITSPKTIDL ASWEEVLEHS TRGFHSTVPS NVSSSSSQPA  300
SIGVVLEEEN MTLGGFLASG SVVKEEFQNF VPIQSNWQIP LGDNSVNLPI WPTDQSSHLE  360
LAYDPGTTLV DPKAHDTIMR NGTELLSTHP VQQNEQPVQN KHQIELTNTE SQSSIKSISK  420
MDMPAEGNIN YASTLKKHLI DGEQGLKKVD SFSRWASKEL GDVDDFHMQT SSGISWSTVE  480
CGNVVDDSSL SPSISQDQFF SIIDFSPKWA YTDSENEVLI IGKFLKSLPE IAKCNWSCMF  540
GEVEVPAEVL AIGVLCCHAP PHSVGRVPFY VTCSNRLACS EVREFDYRVG SIKDIDIAVI  600
YGGATTEMLL HMRLERLLSL ISVGPPSHFV EGVPEKRELI SKVISLKEEE EYYQMAEPIS  660
QNDPSQYEVK EHLLKILMKE KLYSWLLHKV SEDGKGPSVL DDEGQGVLHL AAALGYDWAI  720
KPIVTSGVSI NFRDINGWTA LHWAAYCGRE QTVGFLVSLG ASPGALTDPS PEFPLGRTPA  780
DLAGVNGHKG ISGFLAEHLL TSYLKSLEMN DPNEVRTEVS GQNVSEQTVT PANYGDIPEA  840
LSLRDSLTAV SNATLAADRI HLMFRMHSLE RRRITEYDDD IVRLSDEHAL SVVAAKTRKA  900
KQSDGVVHAA ATQIQKKFRG WKKRKEFLII RQRIVKIQAH VRGHQVRKKY RTIIWSVGIL  960
EKVILRWRRK GIGLRGFRSD ARTEDPKPQD VPSKEDDYDF LKDGRKQTEE RLKKALTRVK  1020
SMVQYPEARA QYSRLRTAVE GFRETKAYNL VLNSSEETVV ADEDLIDIDT LLEDVEDDSF  1080
MSMAFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein