PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023883898.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 225aa    MW: 25586.9 Da    PI: 5.9259
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023883898.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.62.2e-0874121454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RR+r+N++f  L ++l ++   +  K +K +iL  A++ +++L
  XP_023883898.1  74 SKACREKLRRERLNDRFLDLCSVLDPD---RPVKIDKHAILDDAIRVLNQL 121
                     6778**********************9...99****************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDPLPEDWDF LNYSIFDENP SSEFCLPNHS SGGVETDLSS GAVALSQQEK DGAEIECSQS  60
RKRGRNDSYS RPGSKACREK LRRERLNDRF LDLCSVLDPD RPVKIDKHAI LDDAIRVLNQ  120
LRSESQELKE TNEKLKEEIK SLKAEKHELR EEKLMLKADK ERMEQQLKAM AIPPAGFMPG  180
HPAAYHAGPN KMPVFPSYGF VPMWQYMPPA ARDTSHDHEL RPPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.22e-67bHLH family protein