PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023883951.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 92aa    MW: 10472.8 Da    PI: 10.18
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023883951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.22.1e-091357244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     ++WT+   +++ +a +++ ++   +W  +a+ +g g+++++++ ++
   XP_023883951.1 13 NSWTPKQNKQFERALALYDKDtpdRWQNVAKAVG-GKSAEEVRRHY 57
                     58********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MASSSLNSSR GSNSWTPKQN KQFERALALY DKDTPDRWQN VAKAVGGKSA EEVRRHYEIL  60
IQDLINIEAG QIPLPNYKNS GNNERLMKNL RL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.19e-39MYB_related family protein